Here is a list of all variables with links to the classes they belong to:

- r -

• r1 : lm::builder::Ellipse
• r2 : lm::builder::Ellipse
• r3 : lm::builder::Ellipse
• radius : lm::builder::Capsule, lm::builder::Cone, lm::builder::Cylinder, lm::builder::Hemisphere, lm::builder::Mesh, lm::builder::Sphere, pySTDLM.Cells.CapsuleCell, pySTDLM.Cells.CapsuleShellCell, pySTDLM.Cells.SphereCell
• radius1 : lm::builder::Torus
• radius2 : lm::builder::Torus
• randomValues : lm::rng::XORWow
• randomValuesDev : lm::rng::XORWow
• rank : lm::rdme::MPIMpdRdmeSolver
• rate : jLM.Types.Reaction
• rc : jLM.RDME.File, jLM.RDME.Sim
• rdme : jLM.Solvers.ConstBoundaryConc
• reactants : jLM.Types.Reaction
• reaction_map : jLM.CME.CMESimulation
• REACTION_TYPE : CMESolver::CompetitiveMMPropensityArgs, CMESolver::FirstOrderPropensityArgs, CMESolver::KHillPropensityArgs, CMESolver::KHillTransportPropensityArgs, CMESolver::MichaelisMentenPropensityArgs, CMESolver::NoncompetitiveMMPropensityArgs, CMESolver::SecondOrderPropensityArgs, CMESolver::SecondOrderSelfPropensityArgs, CMESolver::UncompetitiveMMPropensityArgs, CMESolver::ZerothOrderHeavisidePropensityArgs, CMESolver::ZerothOrderPropensityArgs, lm::cme::CMESolver::CompetitiveMMPropensityArgs, lm::cme::CMESolver::FirstOrderPropensityArgs, lm::cme::CMESolver::KHillPropensityArgs, lm::cme::CMESolver::KHillTransportPropensityArgs, lm::cme::CMESolver::MichaelisMentenPropensityArgs, lm::cme::CMESolver::NoncompetitiveMMPropensityArgs, lm::cme::CMESolver::SecondOrderPropensityArgs, lm::cme::CMESolver::SecondOrderSelfPropensityArgs, lm::cme::CMESolver::UncompetitiveMMPropensityArgs, lm::cme::CMESolver::ZerothOrderHeavisidePropensityArgs, lm::cme::CMESolver::ZerothOrderPropensityArgs
• reactionEvents : lm::reaction::ReactionQueue, ReactionQueue
• reactionList : jLM.JupyterDisplay.JupyterDisplayMixin, jLM.LmInteract.LmWriteMixin, jLM.RDME.File, jLM.RDME.Sim
• reactionModel : lm::main::ReplicateRunner, ReplicateRunner
• reactionModelModified : lm::rdme::IntMpdRdmeSolver, lm::rdme::MGPUIntMpdRdmeSolver, lm::rdme::MGPUMpdRdmeSolver, lm::rdme::MpdRdmeSolver, MpdRdmeSolver
• reactionPositions : lm::reaction::ReactionQueue, ReactionQueue
• reactionPropensities : lm::rdme::NextSubvolumeSolver
• reactionQueue : lm::cme::NextReactionSolver, lm::rdme::NextSubvolumeSolver, lm::reaction::ReactionQueue, ReactionQueue
• reactions : jLM.CME.CMESimulation, pyLM.CME.CMESimulation, pyLM.RDME.RDMERegion
• reactionTypes : CMESolver, lm::cme::CMESolver
• read_buffer : gpu_info
• recipCollisionGridSpacing : lm::builder::LatticeBuilder
• reg : jLM.RDME.File, jLM.RDME.Sim
• regionBounds : lm::builder::LatticeBuilder
• regionList : jLM.JupyterDisplay.JupyterDisplayMixin, jLM.LmInteract.LmReadMixin, jLM.LmInteract.LmWriteMixin, jLM.RDME.File, jLM.RDME.Sim
• regions : pyLM.RDME.RDMESimulation
• regionShapes : lm::builder::LatticeBuilder
• replicate : CMESolver, H5Lookup, H5MetaData, jLM.LmInteract.LmReadMixin, jLM.RDMEExtended.FileExtended, lm::cme::CMESolver, lm::main::ReplicateRunner, ReplicateRunner
• replicateExitCode : lm::main::ReplicateRunner, ReplicateRunner
• replicateFinished : lm::main::ReplicateRunner, ReplicateRunner
• replicates : jLM.Analysis.TrajAnalysisMixin, jLM.CME.CMESimulation, jLM.LmInteract.LmReadMixin, pyLM.CME.CMESimulation, pyLM.RDME.RDMESimulation
• reservedCpuCores : lm::main::ResourceAllocator, ResourceAllocator
• resources : CMESolver, lm::cme::CMESolver, lm::main::ReplicateRunner, lm::rdme::MGPUIntMpdRdmeSolver, lm::rdme::MGPUMpdRdmeSolver, lm::rdme::MPIMpdRdmeSolver, ReplicateRunner
• returnAvailable : lm::main::DataOutputQueue
• returnList : lm::main::DataOutputQueue
• returnMutex : lm::main::DataOutputQueue
• reverse_reaction_map : jLM.CME.CMESimulation
• RL : lm::rdme::RDMESolver, RDMESolver
• rng : CMESolver, lm::builder::LatticeBuilder, lm::cme::CMESolver, lm::cme::FluctuatingNRSolver::OUPropensityArgs, lm::cme::SelfRegulatingGeneSwitch::OUKHillPropensityArgs
• rngNext : lm::cme::FluctuatingNRSolver::OUPropensityArgs, lm::cme::SelfRegulatingGeneSwitch::OUKHillPropensityArgs
• rotation : lm::builder::Shape
• runner : lm::rdme::gpu_worker_thread_int_params, lm::rdme::gpu_worker_thread_params
• running : lm::thread::Thread
• rx_finish : lm::rdme::MPIMpdRdmeSolver, segmentDescriptor
• rxnRateList : jLM.JupyterDisplay.JupyterDisplayMixin, jLM.LmInteract.LmWriteMixin, jLM.RDME.File, jLM.RDME.Sim