Here is a list of all class members with links to the classes they belong to:
- a -
- abort() : lm::main::LocalDataOutputWorker, lm::thread::Worker, Worker
- aborted : lm::thread::Worker, Worker
- abortWorkers() : lm::thread::WorkerManager, WorkerManager
- absolute_timestep : lm::rdme::MPIMpdRdmeSolver
- active_dimensions : segmentDescriptor
- active_offset : segmentDescriptor
- add_line_with_subsequent_indent() : doxy2swig.Doxy2SWIG
- add_text() : doxy2swig.Doxy2SWIG
- addConcentration() : jLM.CME.CMESimulation, pyLM.CME.CMESimulation
- addCuboidRegion() : pyLM.RDME.RDMESimulation
- addedLast : pySTDLM.Distributions.ParticleGenerator
- addParticle() : CudaByteLattice, CudaByteLatticeExtended, Lattice, lm::rdme::ByteLattice, lm::rdme::CudaByteLattice, lm::rdme::CudaByteLatticeExtended, lm::rdme::CudaIntLattice, lm::rdme::IntLattice, lm::rdme::Lattice
- addParticleAt() : pyLM.RDME.RDMESimulation
- addParticleAtIdx() : pyLM.RDME.RDMESimulation
- addParticleGPU() : CudaByteLatticeExtended, lm::rdme::CudaByteLatticeExtended
- addParticles() : jLM.CME.CMESimulation, lm::builder::LatticeBuilder, lm::rdme::NextSubvolumeSolver, pyLM.CME.CMESimulation, pyLM.RDME.RDMESimulation
- addParticlesToRegion() : pySTDLM.Distributions.ParticleGenerator
- addParticleWithSizeCheck() : CudaByteLatticeExtended, lm::rdme::ByteLatticeExtended, lm::rdme::CudaByteLatticeExtended
- addReaction() : jLM.CME.CMESimulation, jLM.Types.BuilderRegion, pyLM.CME.CMESimulation, pyLM.RDME.RDMERegion
- addRegion() : lm::builder::LatticeBuilder, pyLM.RDME.RDMESimulation
- addShape() : lm::builder::UnionSet, pyLM.RDME.RDMESimulation
- addToParameterTrackingList() : CMESolver, lm::cme::CMESolver
- addToSimulation() : pySTDLM.CellArranger.CellArranger, pySTDLM.Cells.CellShape
- addWorker() : lm::thread::WorkerManager, WorkerManager
- affinity : MultiGPUMapper
- aggcopy_r_pack : lm::rdme::MGPUIntMpdRdmeSolver, lm::rdme::MGPUMpdRdmeSolver
- aggcopy_x_unpack : lm::rdme::MGPUIntMpdRdmeSolver, lm::rdme::MGPUMpdRdmeSolver
- ALL : lm::rng::RandomGenerator, RandomGenerator
- allocateCudaMemory() : CudaByteLattice, CudaByteLatticeExtended, lm::rdme::CudaByteLattice, lm::rdme::CudaByteLatticeExtended, lm::rdme::CudaIntLattice
- allocateDiffusionModel() : lm::rdme::RDMESolver, RDMESolver
- allocateLattice() : lm::MpdRdmeSolverExtended, lm::rdme::IntMpdRdmeSolver, lm::rdme::MGPUIntMpdRdmeSolver, lm::rdme::MGPUMpdRdmeSolver, lm::rdme::MpdRdmeSolver, lm::rdme::MPIMpdRdmeSolver, lm::rdme::RDMESolver, MpdRdmeSolver, pyLM.RDME.IntRDMESimulation, pyLM.RDME.RDMESimulation, RDMESolver
- allocateMemory() : lm::rdme::ByteLattice, lm::rdme::IntLattice
- allocateModel() : CMESolver, lm::cme::CMESolver, lm::rdme::NextSubvolumeSolver
- allowedCellTypes : pySTDLM.CellArranger.CellArranger
- allowedForms : pySTDLM.CellArranger.CellArranger
- alter_chunks() : ZDivMultiGPUMapper
- analyze_lattice_occupancy() : jLM.ParticleSizeSupport.ParticleSizeValidator
- analyze_occupancy_distribution() : jLM.RDMEExtended.SimExtended
- analyze_trajectory_occupancy() : jLM.RDMEExtended.FileExtended
- annotation : jLM.BaseTypes.SimObj
- APPEND_TO_DATASET : H5MetaData
- APPEND_TO_GROUP : H5MetaData
- appendDsToGroup() : lm::io::hdf5::SimulationFile, SimulationFile
- appendLattice() : lm::io::hdf5::SimulationFile, SimulationFile
- appendLattice_U32LE() : lm::io::hdf5::SimulationFile, SimulationFile
- appendParameterValues() : lm::io::hdf5::SimulationFile, SimulationFile
- appendSites() : lm::io::hdf5::SimulationFile, SimulationFile
- appendSpeciesCounts() : lm::io::hdf5::SimulationFile, SimulationFile
- appendToDataset() : lm::io::hdf5::SimulationFile, SimulationFile
- apron : MultiGPUMapper
- ARBITRARY_H5 : lm::main::DataOutputQueue
- ARBITRARY_H5_READ : lm::main::DataOutputQueue
- arbitraryH5() : lm::io::hdf5::SimulationFile, SimulationFile
- arbitraryH5Lookup() : lm::io::hdf5::SimulationFile, SimulationFile
- arrangerAttributes : pySTDLM.CellArranger.CellArranger, pySTDLM.CellArranger.RandomArranger
- assignReaction() : jLM.RDME.SpatialModel
- assignReplicate() : lm::main::ResourceAllocator, ResourceAllocator
- assignToRegion() : jLM.Types.BuilderReaction
- at : lm::builder::Shape
- ATTR : H5Lookup
- attr : H5Lookup
- availableCpuCores : lm::main::ResourceAllocator, ResourceAllocator
- availableDists : lm::rng::RandomGenerator, RandomGenerator