Inheritance diagram for pySTDLM.CellArranger.RandomArranger:

Collaboration diagram for pySTDLM.CellArranger.RandomArranger:

Public Member Functions
	__init__ (self, cellType, cellAttributes, arrangerAttributes)
	newBBox (self, bbox, padding)
	doesIntersect (self, b1, b2)
	outsideDomain (self, b1, mins, maxs)
	intPackVolume (self, sim, mins, maxs)
Public Member Functions inherited from pySTDLM.CellArranger.CellArranger
	__init__ (self, cellType=None, cellAttributes=None, arrangerAttributes=None, name='Unknown')
	cellFactory (self)
	packVolume (self, sim, volume=None)
	addToSimulation (self, sim)
	Add packed volume to RDME simulation.

Additional Inherited Members
Public Attributes inherited from pySTDLM.CellArranger.CellArranger
list	allowedCellTypes = ["Sphere", "Capsule", "Box", "CapsuleShell"]
list	allowedForms = ["Random", "RandomSpherical", "TightGrid", "LooseGrid", "SkewedGrid"]
str	cellType = cellType
	cellAttributes = cellAttributes
list	cells = []
	packerName = name
	arrangerAttributes = arrangerAttributes

Detailed Description

An arranger that randomly orients a number of cells in a regin until either a count or a volume fraction target is met.

This class requires either "fraction" or "number" attributes specified in the arrangerAttributes.  It also has an optional
parameter "padding" which maintains that much padding between the cells and their neighbors.

Constructor & Destructor Documentation

◆ init()

pySTDLM.CellArranger.RandomArranger.__init__	(	self,
		cellType,
		cellAttributes,
		arrangerAttributes )

Member Function Documentation

◆ doesIntersect()

pySTDLM.CellArranger.RandomArranger.doesIntersect	(	self,
		b1,
		b2 )

◆ intPackVolume()

pySTDLM.CellArranger.RandomArranger.intPackVolume	(	self,
		sim,
		mins,
		maxs )

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◆ newBBox()

pySTDLM.CellArranger.RandomArranger.newBBox	(	self,
		bbox,
		padding )

◆ outsideDomain()

pySTDLM.CellArranger.RandomArranger.outsideDomain	(	self,
		b1,
		mins,
		maxs )

The documentation for this class was generated from the following file:

/data2/LM_zls_github/Lattice-Microbes/src/pylm/pySTDLM/CellArranger.py

Public Member Functions

Additional Inherited Members