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Lattice Microbes 2.5
This is for whole cell modeling
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Namespaces | |
| namespace | pySTDLM |
| namespace | pySTDLM.NetworkVisualization |
Functions | |
| pySTDLM.NetworkVisualization.plotReactionNetwork (sim, filename, collapseReversible=False) | |
| pySTDLM.NetworkVisualization.plotCMEReactionNetwork (sim, filename, withRxnNodes=False, collapseReversible=False) | |
| pySTDLM.NetworkVisualization.plotRDMEReactionNetwork (sim, filename, collapseReversible=False) | |
| pySTDLM.NetworkVisualization.plotCMEDynamicReactionNetwork (sim, filename, outfile, stride=1, showMax=False, showMin=False, threshold=-1, replicate=1) | |
Variables | |
| bool | pySTDLM.NetworkVisualization.hasGexf = True |