Lattice Microbes 2.5
This is for whole cell modeling
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lm_setdm.cpp File Reference
#include <iostream>
#include <list>
#include <string>
#include <utility>
#include <vector>
#include <cmath>
#include <cstdlib>
#include <cstdio>
#include <cstring>
#include <sys/stat.h>
#include "core/Exceptions.h"
#include "DiffusionModel.pb.h"
#include "ReactionModel.pb.h"
#include "io/SimulationFile.h"
#include "rng/XORShift.h"
#include "lptf/Profile.h"
#include "core/util.h"
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Functions

void parseArguments (int argc, char **argv)
void printUsage (int argc, char **argv)
int main (int argc, char **argv)

Variables

string function = ""
string filename = ""
list< pair< string, string > > parameters
bool autoplace = true
 PROF_ALLOC

Function Documentation

◆ main()

int main ( int argc,
char ** argv )
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◆ parseArguments()

void parseArguments ( int argc,
char ** argv )

Parses the command line arguments.

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◆ printUsage()

void printUsage ( int argc,
char ** argv )

Prints the usage for the program.

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Variable Documentation

◆ autoplace

bool autoplace = true

Whether we should place particles automatically.

◆ filename

string filename = ""

The file to modify.

◆ function

string function = ""

The function being performed.

◆ parameters

list<pair<string,string> > parameters

The parameters to set in the file.

◆ PROF_ALLOC

PROF_ALLOC