Lattice Microbes 2.5
This is for whole cell modeling
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CMESolver.h File Reference
#include <map>
#include <list>
#include <string>
#include <utility>
#include "core/Math.h"
#include "FirstPassageTimes.pb.h"
#include "ParameterValues.pb.h"
#include "core/ResourceAllocator.h"
#include "rng/RandomGenerator.h"
#include "me/MESolver.h"
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Classes

class  lm::cme::CMESolver
struct  lm::cme::CMESolver::PropensityArgs
struct  lm::cme::CMESolver::ZerothOrderPropensityArgs
struct  lm::cme::CMESolver::FirstOrderPropensityArgs
struct  lm::cme::CMESolver::SecondOrderPropensityArgs
struct  lm::cme::CMESolver::SecondOrderSelfPropensityArgs
struct  lm::cme::CMESolver::KHillPropensityArgs
struct  lm::cme::CMESolver::KHillTransportPropensityArgs
struct  lm::cme::CMESolver::ZerothOrderHeavisidePropensityArgs
struct  lm::cme::CMESolver::MichaelisMentenPropensityArgs
struct  lm::cme::CMESolver::CompetitiveMMPropensityArgs
struct  lm::cme::CMESolver::UncompetitiveMMPropensityArgs
struct  lm::cme::CMESolver::NoncompetitiveMMPropensityArgs
struct  lm::cme::CMESolver::SpeciesLimit
struct  lm::cme::CMESolver::FPTTracking
struct  lm::cme::CMESolver::TrackedParameter
class  MESolver
 An abstract base class for all Master Equation solvers, this is essentially a representation of "the simulation instance". More...

Namespaces

namespace  lm
namespace  lm::io
namespace  lm::cme