An abstract base class for all Master Equation solvers, this is essentially a representation of "the simulation instance". More...

#include <MESolver.h>

Inheritance diagram for MESolver:

Public Member Functions
	MESolver ()
	Create the MESolver.
virtual	~MESolver ()
virtual void	initialize (unsigned int replicate, map< string, string > parameters, ResourceAllocator::ComputeResources resources)=0
	Initialize the simulation.
virtual bool	needsReactionModel ()=0
	Tells whether the solver needs a reaction model.
virtual bool	needsDiffusionModel ()=0
	Tells whether the solver needs a reaction model.
virtual void	generateTrajectory ()=0
	Actually run the simulation.

Detailed Description

An abstract base class for all Master Equation solvers, this is essentially a representation of "the simulation instance".

Constructor & Destructor Documentation

lm::me::MESolver::MESolver ( )

Create the MESolver.

lm::me::MESolver::~MESolver ( )

virtual

virtual void lm::me::MESolver::generateTrajectory ( )

pure virtual

Actually run the simulation.

virtual void lm::me::MESolver::initialize	(	unsigned int	replicate,
		map< string, string > *	parameters,
		ResourceAllocator::ComputeResources *	resources )

pure virtual

Initialize the simulation.

Parameters

replicate	Replicate number out of total replicates
parameters	A map of all the parameters for the simulation
A	list of resources assigned to the simulation

virtual bool lm::me::MESolver::needsDiffusionModel ( )

pure virtual

Tells whether the solver needs a reaction model.

virtual bool lm::me::MESolver::needsReactionModel ( )

pure virtual

Tells whether the solver needs a reaction model.

The documentation for this class was generated from the following files: