PostProcessing.py File Reference

Namespaces
namespace	pySTDLM
namespace	pySTDLM.PostProcessing

Functions
	pySTDLM.PostProcessing.openLMFile (filename)
	pySTDLM.PostProcessing.closeLMFile (f)
	pySTDLM.PostProcessing.showTraceFromFile (filename, species, replicate, **kwargs)
	pySTDLM.PostProcessing.plotTraceFromFile (filename, species, replicate, outfile, **kwargs)
	pySTDLM.PostProcessing.showTrace (f, species, replicate, **kwargs)
	pySTDLM.PostProcessing.plotTrace (f, species=None, replicate=1, filename=None, **kwargs)
	pySTDLM.PostProcessing.showAvgVarFromFile (filename, species, **kwargs)
	pySTDLM.PostProcessing.plotAvgVarFromFile (filename, species, outfile, **kwargs)
	pySTDLM.PostProcessing.showAvgVar (f, species, **kwargs)
	pySTDLM.PostProcessing.plotAvgVar (f, species=None, filename=None, **kwargs)
	pySTDLM.PostProcessing.getOccupancyKymograph (f, species=None, replicate=1)
	pySTDLM.PostProcessing.plotOccupancyKymograph (f, species=None, replicate=1, filename=None)
	pySTDLM.PostProcessing.showOccupancyKymograph (f, species=None, replicate=1)
	pySTDLM.PostProcessing.plotPhaseSpace (f, species=None, replicate=1, withHistogram=False)
	pySTDLM.PostProcessing.getSpecies (f)
	pySTDLM.PostProcessing.getTimesteps (f)
	pySTDLM.PostProcessing.getSpecieTrace (f, specie, replicate=1, doublingTime=None)
	pySTDLM.PostProcessing.getAvgVarTrace (f, specie, doublingTime=None)
	pySTDLM.PostProcessing.getHistogram (f, species)
	pySTDLM.PostProcessing.getPhaseSpace (f, species, replicate)