| Lattice Microbes 2.5
    This is for whole cell modeling | 
| File in Lattice-Microbes/src/core | Includes file in Lattice-Microbes/src/cme | 
|---|---|
| ReplicateRunner.cpp | CMESolver.h | 
| ReplicateRunner.cpp | GillespieDSolver.h | 
| ReplicateRunner.cpp | HillSwitch.h | 
| ReplicateRunner.cpp | SelfRegulatingGeneSwitch.h | 
| ReplicateRunner.cpp | TwoStateExpression.h | 
| ReplicateRunner.cpp | TwoStateHillLoopSwitch.h | 
| ReplicateRunner.cpp | TwoStateHillSwitch.h | 
| runSimulation.cpp | CMESolver.h |