Lattice Microbes 2.5
This is for whole cell modeling
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MPIMpdRdmeSolver.h File Reference
Include dependency graph for MPIMpdRdmeSolver.h:

Go to the source code of this file.

Classes

class  lm::rdme::MPIMpdRdmeSolver

Namespaces

namespace  lm
namespace  lm::io
namespace  lm::rdme

Functions

__device__ size_t lm::rdme::local_to_global (unsigned int x, unsigned int y, unsigned int z)
__device__ size_t lm::rdme::local_index (unsigned int x, unsigned int y, unsigned int z)
__global__ void lm::rdme::MPI_x_kernel (const unsigned int *inLattice, const uint8_t *inSites, unsigned int *outLattice, const unsigned int z_start, const unsigned long long timestepHash, unsigned int *siteOverflowList)
__global__ void lm::rdme::MPI_y_kernel (const unsigned int *inLattice, const uint8_t *inSites, unsigned int *outLattice, const unsigned long long timestepHash, unsigned int *siteOverflowList)
__global__ void lm::rdme::MPI_z_kernel (const unsigned int *inLattice, const uint8_t *inSites, unsigned int *outLattice, const unsigned long long timestepHash, unsigned int *siteOverflowList, const unsigned int z_start)
__global__ void lm::rdme::MPI_reaction_kernel (const unsigned int *inLattice, const uint8_t *inSites, unsigned int *outLattice, const unsigned long long timestepHash, unsigned int *siteOverflowList, const unsigned int z_start)
__global__ void lm::rdme::mpi_correct_overflows (unsigned int *inLattice, unsigned int *siteOverflowList)