Lattice Microbes
2.5
This is for whole cell modeling
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Here is a list of all functions with links to the classes they belong to:
- u -
uncompetitiveMMPropensity() :
CMESolver
,
lm::cme::CMESolver
UncompetitiveMMPropensityArgs() :
CMESolver::UncompetitiveMMPropensityArgs
,
lm::cme::CMESolver::UncompetitiveMMPropensityArgs
unfreeze() :
jLM.BaseTypes.SimObjs
Union() :
lm::builder::Union
UnionSet() :
lm::builder::UnionSet
unitize() :
lm::builder::vector
updateAllPropensities() :
lm::cme::GillespieDSolver
updateAllReactionEvents() :
lm::cme::NextReactionSolver
updateAllSubvolumePropensities() :
lm::rdme::NextSubvolumeSolver
updateCurrentSubvolumeSpeciesCounts() :
lm::rdme::NextSubvolumeSolver
updateGPUSiteSizes() :
CudaByteLatticeExtended
,
lm::rdme::CudaByteLatticeExtended
updatePropensities() :
lm::cme::GillespieDSolver
updateReactionEvent() :
lm::reaction::ReactionQueue
,
ReactionQueue
updateReactionEvents() :
lm::cme::NextReactionSolver
updateSiteSize() :
CudaByteLatticeExtended
,
lm::rdme::CudaByteLatticeExtended
updateSpeciesCounts() :
CMESolver
,
lm::cme::CMESolver
updateSpeciesCountsForSubvolume() :
lm::rdme::NextSubvolumeSolver
updateSubvolumePropensity() :
lm::rdme::NextSubvolumeSolver
updateSubvolumeWithSpeciesCounts() :
lm::rdme::NextSubvolumeSolver
use() :
MultiGPUMapper
useFastSizeAwareDiffusion() :
lm::MpdRdmeSolverExtended
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