Lattice Microbes 2.5
This is for whole cell modeling
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jLM.LmInteract.LmWriteMixin Member List

This is the complete list of members for jLM.LmInteract.LmWriteMixin, including all inherited members.

_buildDiffusionMatrix(self)jLM.LmInteract.LmWriteMixinprotected
_buildReactionLocationMatrix(self)jLM.LmInteract.LmWriteMixinprotected
_buildReactionMatricies(self)jLM.LmInteract.LmWriteMixinprotected
_diffParamMatrixjLM.LmInteract.LmWriteMixinprotected
_diffusionModel(self)jLM.LmInteract.LmWriteMixinprotected
_particleDistConcjLM.LmInteract.LmWriteMixinprotected
_particleDistCountjLM.LmInteract.LmWriteMixinprotected
_particlePlacementjLM.LmInteract.LmWriteMixinprotected
_particlesPlacedjLM.LmInteract.LmWriteMixinprotected
_placeAllParticles(self)jLM.LmInteract.LmWriteMixinprotected
_reactionLocationsjLM.LmInteract.LmWriteMixinprotected
_reactionModel(self)jLM.LmInteract.LmWriteMixinprotected
_rxnParamMatrixjLM.LmInteract.LmWriteMixinprotected
_spatialModel(self)jLM.LmInteract.LmWriteMixinprotected
_spCtsjLM.LmInteract.LmWriteMixinprotected
_storeParamData(self)jLM.LmInteract.LmWriteMixinprotected
_transitionRatesjLM.LmInteract.LmWriteMixinprotected
bytesPerParticlejLM.LmInteract.LmWriteMixin
copyParticleLattice(self, fname, diffusion_model=False, replicate=1, frame=-1)jLM.LmInteract.LmWriteMixin
diffRateListjLM.LmInteract.LmWriteMixin
filenamejLM.LmInteract.LmWriteMixin
finalize(self)jLM.LmInteract.LmWriteMixin
h5(self)jLM.LmInteract.LmWriteMixin
hookIntervaljLM.LmInteract.LmWriteMixin
latticejLM.LmInteract.LmWriteMixin
latticeSpacingjLM.LmInteract.LmWriteMixin
latticeWriteIntervaljLM.LmInteract.LmWriteMixin
NrxnjLM.LmInteract.LmWriteMixin
NspsjLM.LmInteract.LmWriteMixin
NstsjLM.LmInteract.LmWriteMixin
particleLatticejLM.LmInteract.LmWriteMixin
perfPrintIntervaljLM.LmInteract.LmWriteMixin
ppsjLM.LmInteract.LmWriteMixin
reactionListjLM.LmInteract.LmWriteMixin
regionListjLM.LmInteract.LmWriteMixin
rxnRateListjLM.LmInteract.LmWriteMixin
simulationTimejLM.LmInteract.LmWriteMixin
siteLatticejLM.LmInteract.LmWriteMixin
speciesWriteIntervaljLM.LmInteract.LmWriteMixin
timestepjLM.LmInteract.LmWriteMixin