Lattice Microbes 2.5
This is for whole cell modeling
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Cuboid.h
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1/*
2 * University of Illinois Open Source License
3 * Copyright 2011-2018 Luthey-Schulten Group,
4 * All rights reserved.
5 *
6 * Developed by: Luthey-Schulten Group
7 * University of Illinois at Urbana-Champaign
8 * http://www.scs.uiuc.edu/~schulten
9 *
10 * Permission is hereby granted, free of charge, to any person obtaining a copy of
11 * this software and associated documentation files (the Software), to deal with
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13 * use, copy, modify, merge, publish, distribute, sublicense, and/or sell copies
14 * of the Software, and to permit persons to whom the Software is furnished to
15 * do so, subject to the following conditions:
16 *
17 * - Redistributions of source code must retain the above copyright notice,
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21 * this list of conditions and the following disclaimers in the documentation
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24 * - Neither the names of the Luthey-Schulten Group, University of Illinois at
25 * Urbana-Champaign, nor the names of its contributors may be used to endorse or
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37 * Author(s): Andrew Magis, Elijah Roberts
38 */
39
40#ifndef LM_BUILDER_CUBOID_H_
41#define LM_BUILDER_CUBOID_H_
42
43#include "builder/Shape.h"
44#include "rdme/Lattice.h"
45
46namespace lm {
47namespace builder {
48
51class Cuboid : public Shape
52{
53public:
66 Cuboid(point center, si_dist_t w, si_dist_t h, si_dist_t d, site_t type, vector at = vector(1.0,0.0,0.0), vector up = vector(0.0,1.0,0.0));
67
69 virtual ~Cuboid();
70
74 virtual bool intersects(Shape * query);
78 virtual bool contains(point query);
82 virtual bool contains(Shape * query);
84 virtual point getP1() {return p1;}
86 virtual point getP2() {return p2;}
88 virtual double getVolume();
89
90protected:
93
97};
98
99}
100}
101
102#endif
103
uint32_t site_t
Definition Lattice.h:74
double si_dist_t
Definition Types.h:63
virtual bool contains(point query)
Determine if the shape contains the specified point.
Definition Cuboid.cpp:189
virtual point getP1()
Get the lower point.
Definition Cuboid.h:84
virtual point getP2()
Get the upper point.
Definition Cuboid.h:86
virtual double getVolume()
Get the volume bounded by the cuboid shape.
Definition Cuboid.cpp:228
point cen
Definition Cuboid.h:92
point p2
Definition Cuboid.h:91
virtual ~Cuboid()
Destroy the Cuboid.
Definition Cuboid.cpp:172
point p1
Definition Cuboid.h:91
Cuboid(point p1, point p2, site_t type)
Create a Cuboid that is axis aligned.
Definition Cuboid.cpp:49
si_dist_t width
Definition Cuboid.h:94
si_dist_t depth
Definition Cuboid.h:96
si_dist_t height
Definition Cuboid.h:95
virtual bool intersects(Shape *query)
Check if two shapes intersect.
Definition Cuboid.cpp:176
vector up
Definition Shape.h:382
vector at
Definition Shape.h:381
site_t type
Definition Shape.h:378
Shape(ShapeType shapeType, bounding_box boundingBox, site_t type, vector at=vector(0.0, 0.0, 1.0), vector up=vector(0.0, 1.0, 0.0))
Create a Shape.
Definition Shape.cpp:129
Definition Capsule.cpp:47
struct lm::builder::vector vector
Definition Capsule.cpp:46
Type to store a position in space.
Definition Shape.h:67
A vector which points in a direction.
Definition Shape.h:153