jLM.CME.CMESimulation Member List

This is the complete list of members for jLM.CME.CMESimulation, including all inherited members.

__init__(self, volume=None, name="unnamed")	jLM.CME.CMESimulation
_repr_html_(self)	jLM.CME.CMESimulation	protected
addConcentration(self, species='unknown', conc=0.0)	jLM.CME.CMESimulation
addParticles(self, species='unknown', count=1)	jLM.CME.CMESimulation
addReaction(self, reactant, product, rate, name=None)	jLM.CME.CMESimulation
buildReactionModel(self)	jLM.CME.CMESimulation
defineSpecies(self, species)	jLM.CME.CMESimulation
filename	jLM.CME.CMESimulation
initial_counts	jLM.CME.CMESimulation
name	jLM.CME.CMESimulation
parameters	jLM.CME.CMESimulation
particleMap	jLM.CME.CMESimulation
reaction_map	jLM.CME.CMESimulation
reactions	jLM.CME.CMESimulation
replicates	jLM.CME.CMESimulation
reverse_reaction_map	jLM.CME.CMESimulation
run(self, filename, method, replicates=1, seed=None, cudaDevices=[], checkpointInterval=0)	jLM.CME.CMESimulation
runMPI(self, filename, method, replicates=1, driver="mpirun", ppe=1, seed=None)	jLM.CME.CMESimulation
runSolver(self, filename, solver, replicates=1, cudaDevices=None, checkpointInterval=0)	jLM.CME.CMESimulation
save(self, filename)	jLM.CME.CMESimulation
setHookInterval(self, time)	jLM.CME.CMESimulation
setRandomSeed(self, seed)	jLM.CME.CMESimulation
setSimulationTime(self, time)	jLM.CME.CMESimulation
setTimestep(self, time)	jLM.CME.CMESimulation
setWriteInterval(self, time)	jLM.CME.CMESimulation
species_id	jLM.CME.CMESimulation
volume	jLM.CME.CMESimulation