Lattice Microbes 2.5
This is for whole cell modeling
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Lattice Member List

This is the complete list of members for Lattice, including all inherited members.

addParticle(lattice_size_t x, lattice_size_t y, lattice_size_t z, particle_t particle)=0Latticepure virtual
addParticle(lattice_size_t index, particle_t particle)=0Latticepure virtual
findParticles(particle_t minParticleType, particle_t maxParticleType)=0Latticepure virtual
getLatticeMemorySize() const=0Latticepure virtual
getMaxOccupancy() const=0Latticepure virtual
getMaxParticle() const=0Latticepure virtual
getMaxSiteType() const=0Latticepure virtual
getNearbySites(lattice_size_t xc, lattice_size_t yc, lattice_size_t zc, uint minDistance, uint maxDistance)Lattice
getNeighboringSites(lattice_size_t index, lattice_size_t *neighboringIndices)=0Latticepure virtual
getNumberSites() constLatticevirtual
getOccupancy(lattice_size_t x, lattice_size_t y, lattice_size_t z) const=0Latticepure virtual
getOccupancy(lattice_size_t index) const=0Latticepure virtual
getParticle(lattice_size_t x, lattice_size_t y, lattice_size_t z, site_size_t particleIndex) const=0Latticepure virtual
getParticle(lattice_size_t index, site_size_t particleIndex) const=0Latticepure virtual
getParticleCounts()=0Latticepure virtual
getSiteType(lattice_size_t x, lattice_size_t y, lattice_size_t z) const=0Latticepure virtual
getSiteType(lattice_size_t index) const=0Latticepure virtual
getSize() constLatticevirtual
getSpacing() constLatticevirtual
getXSize() constLatticevirtual
getYSize() constLatticevirtual
getZSize() constLatticevirtual
Lattice(lattice_coord_t size, si_dist_t spacing)Lattice
Lattice(lattice_size_t xSize, lattice_size_t ySize, lattice_size_t zSize, si_dist_t spacing)Lattice
numberSitesLatticeprotected
print() constLatticevirtual
removeAllParticles()Latticevirtual
removeParticles(lattice_size_t x, lattice_size_t y, lattice_size_t z)=0Latticepure virtual
removeParticles(lattice_size_t index)=0Latticepure virtual
rowMajorByteSerialize(void *destBuffer, void *lattice, size_t bufferSize)Latticestatic
rowMajorByteSerializeSites(void *destBuffer, void *lattice, size_t bufferSize)Latticestatic
rowMajorIntSerialize(void *destBuffer, void *lattice, size_t bufferSize)Latticestatic
setFromRowMajorByteData(void *buffer, size_t bufferSize)=0Latticepure virtual
setSitesFromRowMajorByteData(void *buffer, size_t bufferSize)=0Latticepure virtual
setSiteType(lattice_size_t x, lattice_size_t y, lattice_size_t z, site_t site)=0Latticepure virtual
setSiteType(lattice_size_t index, site_t site)=0Latticepure virtual
sizeLatticeprotected
spacingLatticeprotected
~Lattice()Latticevirtual