| Lattice Microbes 2.5
    This is for whole cell modeling | 
This is the complete list of members for lm::rdme::ByteLatticeExtended, including all inherited members.
| addParticle(lattice_size_t x, lattice_size_t y, lattice_size_t z, particle_t particle) | lm::rdme::ByteLattice | virtual | 
| addParticle(lattice_size_t subvolume, particle_t particle) | lm::rdme::ByteLattice | virtual | 
| addParticleWithSizeCheck(lattice_size_t x, lattice_size_t y, lattice_size_t z, particle_t particle) | lm::rdme::ByteLatticeExtended | virtual | 
| addParticleWithSizeCheck(lattice_size_t subvolume, particle_t particle) | lm::rdme::ByteLatticeExtended | virtual | 
| allocateMemory() | lm::rdme::ByteLattice | protectedvirtual | 
| ByteLattice(lattice_coord_t size, si_dist_t spacing, uint particlesPerSite) | lm::rdme::ByteLattice | |
| ByteLattice(lattice_size_t xSize, lattice_size_t ySize, lattice_size_t zSize, si_dist_t spacing, uint particlesPerSite) | lm::rdme::ByteLattice | |
| ByteLatticeExtended(lattice_coord_t size, si_dist_t spacing, uint particlesPerSite, bool enableSizeChecking=true) | lm::rdme::ByteLatticeExtended | |
| ByteLatticeExtended(lattice_size_t xSize, lattice_size_t ySize, lattice_size_t zSize, si_dist_t spacing, uint particlesPerSite, bool enableSizeChecking=true) | lm::rdme::ByteLatticeExtended | |
| canAddParticle(lattice_size_t x, lattice_size_t y, lattice_size_t z, particle_t particle) const | lm::rdme::ByteLatticeExtended | |
| canAddParticle(lattice_size_t subvolume, particle_t particle) const | lm::rdme::ByteLatticeExtended | |
| copyNativeToRowMajorByte(void *destBuffer, void *sourceBuffer, lattice_size_t xSize, lattice_size_t ySize, lattice_size_t zSize, uint particlesPerSite, size_t bufferSize) | lm::rdme::ByteLattice | static | 
| copyRowMajorByteToNative(void *destBuffer, void *sourceBuffer, lattice_size_t xSize, lattice_size_t ySize, lattice_size_t zSize, uint particlesPerSite, size_t bufferSize) | lm::rdme::ByteLattice | static | 
| copySites(void *destBuffer, size_t latticeSize) | lm::rdme::ByteLattice | |
| copySitesNativeToRowMajorByte(void *destBuffer, void *sourceBuffer, lattice_size_t xSize, lattice_size_t ySize, lattice_size_t zSize, size_t bufferSize) | lm::rdme::ByteLattice | static | 
| copySitesRowMajorByteToNative(void *destBuffer, void *sourceBuffer, lattice_size_t xSize, lattice_size_t ySize, lattice_size_t zSize, size_t bufferSize) | lm::rdme::ByteLattice | static | 
| deallocateMemory() | lm::rdme::ByteLattice | protectedvirtual | 
| findParticles(particle_t minParticleType, particle_t maxParticleType) | lm::rdme::ByteLattice | virtual | 
| getLatticeMemorySize() const | lm::rdme::ByteLattice | virtual | 
| getMaxOccupancy() const | lm::rdme::ByteLattice | virtual | 
| getMaxParticle() const | lm::rdme::ByteLattice | virtual | 
| getMaxParticleCount(lattice_size_t x, lattice_size_t y, lattice_size_t z, particle_t particleType) const | lm::rdme::ByteLatticeExtended | |
| getMaxParticleCount(lattice_size_t subvolume, particle_t particleType) const | lm::rdme::ByteLatticeExtended | |
| getMaxSiteType() const | lm::rdme::ByteLattice | virtual | 
| getNearbySites(lattice_size_t xc, lattice_size_t yc, lattice_size_t zc, uint minDistance, uint maxDistance) | lm::rdme::Lattice | |
| getNeighboringSites(lattice_size_t index, lattice_size_t *neighboringIndices) | lm::rdme::ByteLattice | virtual | 
| getNumberSites() const | lm::rdme::Lattice | virtual | 
| getOccupancy(lattice_size_t x, lattice_size_t y, lattice_size_t z) const | lm::rdme::ByteLattice | virtual | 
| getOccupancy(lattice_size_t subvolume) const | lm::rdme::ByteLattice | virtual | 
| getParticle(lattice_size_t x, lattice_size_t y, lattice_size_t z, site_size_t particleIndex) const | lm::rdme::ByteLattice | virtual | 
| getParticle(lattice_size_t subvolume, site_size_t particleIndex) const | lm::rdme::ByteLattice | virtual | 
| getParticleCounts() | lm::rdme::ByteLattice | virtual | 
| getParticleLatticeView(uint8_t **particleLattice, int *Nw, int *Nz, int *Ny, int *Nx, int *Np) | lm::rdme::ByteLattice | virtual | 
| getParticlesAtSite(lattice_size_t subvolume, particle_t *particles, site_size_t maxCount) const | lm::rdme::ByteLatticeExtended | protected | 
| getParticleSize(particle_t particleType) const | lm::rdme::ByteLatticeExtended | |
| getParticleSizeManager() const | lm::rdme::ByteLatticeExtended | |
| getParticlesMemory() | lm::rdme::ByteLattice | protectedvirtual | 
| getSiteLatticeView(uint8_t **siteLattice, int *Nz, int *Ny, int *Nx) | lm::rdme::ByteLattice | virtual | 
| getSitesMemory() | lm::rdme::ByteLattice | protectedvirtual | 
| getSiteType(lattice_size_t x, lattice_size_t y, lattice_size_t z) const | lm::rdme::ByteLattice | virtual | 
| getSiteType(lattice_size_t subvolume) const | lm::rdme::ByteLattice | virtual | 
| getSize() const | lm::rdme::Lattice | virtual | 
| getSizeBasedOccupancy(lattice_size_t x, lattice_size_t y, lattice_size_t z) const | lm::rdme::ByteLatticeExtended | |
| getSizeBasedOccupancy(lattice_size_t subvolume) const | lm::rdme::ByteLatticeExtended | |
| getSizeBasedOccupancyStats() const | lm::rdme::ByteLatticeExtended | |
| getSpacing() const | lm::rdme::Lattice | virtual | 
| getXSize() const | lm::rdme::Lattice | virtual | 
| getYSize() const | lm::rdme::Lattice | virtual | 
| getZSize() const | lm::rdme::Lattice | virtual | 
| isSizeCheckingEnabled() const | lm::rdme::ByteLatticeExtended | |
| Lattice(lattice_coord_t size, si_dist_t spacing) | lm::rdme::Lattice | |
| Lattice(lattice_size_t xSize, lattice_size_t ySize, lattice_size_t zSize, si_dist_t spacing) | lm::rdme::Lattice | |
| maxSiteCapacity_ | lm::rdme::ByteLatticeExtended | protected | 
| nativeSerialize(void *destBuffer, void *lattice, size_t latticeSize) | lm::rdme::ByteLattice | static | 
| nativeSerializeSites(void *destBuffer, void *lattice, size_t latticeSize) | lm::rdme::ByteLattice | static | 
| numberSites | lm::rdme::Lattice | protected | 
| particles | lm::rdme::ByteLattice | protected | 
| print() const | lm::rdme::Lattice | virtual | 
| removeAllParticles() | lm::rdme::ByteLattice | virtual | 
| removeParticles(lattice_size_t x, lattice_size_t y, lattice_size_t z) | lm::rdme::ByteLattice | virtual | 
| removeParticles(lattice_size_t subvolume) | lm::rdme::ByteLattice | virtual | 
| rowMajorByteSerialize(void *destBuffer, void *lattice, size_t bufferSize) | lm::rdme::Lattice | static | 
| rowMajorByteSerializeSites(void *destBuffer, void *lattice, size_t bufferSize) | lm::rdme::Lattice | static | 
| rowMajorIntSerialize(void *destBuffer, void *lattice, size_t bufferSize) | lm::rdme::Lattice | static | 
| setFromRowMajorByteData(void *buffer, size_t bufferSize) | lm::rdme::ByteLattice | virtual | 
| setParticleSize(particle_t particleType, uint32_t size) | lm::rdme::ByteLatticeExtended | |
| setSitesFromRowMajorByteData(void *buffer, size_t bufferSize) | lm::rdme::ByteLattice | virtual | 
| setSiteType(lattice_size_t x, lattice_size_t y, lattice_size_t z, site_t siteType) | lm::rdme::ByteLattice | virtual | 
| setSiteType(lattice_size_t subvolume, site_t site) | lm::rdme::ByteLattice | virtual | 
| setSizeCheckingEnabled(bool enable) | lm::rdme::ByteLatticeExtended | |
| siteTypes | lm::rdme::ByteLattice | protected | 
| size | lm::rdme::Lattice | protected | 
| sizeCheckingEnabled_ | lm::rdme::ByteLatticeExtended | protected | 
| sizeManager_ | lm::rdme::ByteLatticeExtended | protected | 
| spacing | lm::rdme::Lattice | protected | 
| validateSizeConstraints() const | lm::rdme::ByteLatticeExtended | |
| wordsPerSite | lm::rdme::ByteLattice | protected | 
| ~ByteLattice() | lm::rdme::ByteLattice | virtual | 
| ~ByteLatticeExtended()=default | lm::rdme::ByteLatticeExtended | virtual | 
| ~Lattice() | lm::rdme::Lattice | virtual |